{"id":6474,"date":"2022-11-09T15:47:24","date_gmt":"2022-11-09T20:47:24","guid":{"rendered":"https:\/\/ptp.cloud\/?p=6474"},"modified":"2025-07-22T02:06:33","modified_gmt":"2025-07-22T06:06:33","slug":"hpc-in-life-sciences-with-aws-and-ptp","status":"publish","type":"post","link":"https:\/\/ptp.cloud\/hpc-in-life-sciences-with-aws-and-ptp\/","title":{"rendered":"HPC in Life Sciences: How PTP Optimizes AWS for Biotech Research"},"content":{"rendered":"[et_pb_section fb_built=&#8221;1&#8243; admin_label=&#8221;section&#8221; _builder_version=&#8221;4.16&#8243; custom_padding=&#8221;||0px|||&#8221; da_disable_devices=&#8221;off|off|off&#8221; global_colors_info=&#8221;{}&#8221; da_is_popup=&#8221;off&#8221; da_exit_intent=&#8221;off&#8221; da_has_close=&#8221;on&#8221; da_alt_close=&#8221;off&#8221; da_dark_close=&#8221;off&#8221; da_not_modal=&#8221;on&#8221; da_is_singular=&#8221;off&#8221; da_with_loader=&#8221;off&#8221; da_has_shadow=&#8221;on&#8221;][et_pb_row _builder_version=&#8221;4.25.0&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;4.25.0&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_code _builder_version=&#8221;4.27.4&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;]\n<article><!-- [et_pb_line_break_holder] --><pee><!-- [et_pb_line_break_holder] -->High-performance computing (HPC) is no longer a luxury\u2014it\u2019s a necessity in life sciences. From genomics to simulations, today\u2019s research environments demand cloud-native performance, security, and flexibility. In this episode of the CloudOps Podcast, <a href=\"https:\/\/ptp.cloud\/aws-consulting\/aws-for-life-sciences\/\" title=\"AWS MSP for life sciences\">AWS Life Sciences Partner PTP<\/a> shares how their team builds, secures, and scales HPC environments with AWS-native tools, research-aligned architecture, and hands-on support.<!-- [et_pb_line_break_holder] --><\/pee><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><\/p>\n<div style=\"position: relative; padding-bottom: 56.25%; height: 0; overflow: hidden; margin-top: 1.5em;\"><!-- [et_pb_line_break_holder] --><iframe<!-- [et_pb_line_break_holder] -->src=&#8221;https:\/\/www.youtube-nocookie.com\/embed\/ud57yCG7BSQ?rel=0&#8243;<!-- [et_pb_line_break_holder] -->title=&#8221;HPC in Life Sciences with AWS and PTP&#8221;<!-- [et_pb_line_break_holder] -->loading=&#8221;lazy&#8221;<!-- [et_pb_line_break_holder] -->style=&#8221;position: absolute; top: 0; left: 0; width: 100%; height: 100%; border: 0;&#8221;<!-- [et_pb_line_break_holder] -->referrerpolicy=&#8221;strict-origin-when-cross-origin&#8221;<!-- [et_pb_line_break_holder] -->allow=&#8221;accelerometer; autoplay; clipboard-write; encrypted-media; gyroscope; picture-in-picture; web-share&#8221;<!-- [et_pb_line_break_holder] -->allowfullscreen><!-- [et_pb_line_break_holder] --><\/iframe><!-- [et_pb_line_break_holder] --><\/div>\n<p><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><pee><!-- [et_pb_line_break_holder] -->PTP Senior Cloud Architect Aaron Jeskey joins Jon Myer to explain how biotech and clinical research teams are optimizing AWS infrastructure for performance, security, and compliance. Drawing from years of hands-on experience in scientific computing and managed IT services for life sciences, Aaron walks through real examples where PTP helped customers transform underperforming HPC environments into scalable, compliant platforms for innovation.<!-- [et_pb_line_break_holder] --><\/pee><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><\/p>\n<h3>\ud83e\udde0 From Cluster Chaos to Cost Control<\/h3>\n<p><!-- [et_pb_line_break_holder] --><pee><!-- [et_pb_line_break_holder] -->Many early-stage biotech organizations inherit legacy workflows and ad hoc cloud setups. PTP starts by performing a <a href=\"https:\/\/ptp.cloud\/aws-consulting\/aws-well-architected-framework\/\" title=\"AWS Well-Architected Review\">Well-Architected Review<\/a> to identify risks, cost inefficiencies, and performance bottlenecks. This step is crucial in optimizing research IT infrastructure without disrupting scientific operations.<!-- [et_pb_line_break_holder] --><\/pee><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><\/p>\n<h3>\ud83d\udd12 Built-In Security for Life Sciences Compliance<\/h3>\n<p><!-- [et_pb_line_break_holder] --><pee><!-- [et_pb_line_break_holder] -->Data protection is top of mind for life sciences companies dealing with HIPAA, GxP, and GDPR. PTP helps clients implement Transit Gateway, VPN, IAM policies, and encrypted storage for full-stack security\u2014backed by tools like its <a href=\"https:\/\/ptp.cloud\/services\/secops\/security-risk-assessment\/\" title=\"Security Risk Assessment\">Security Risk Assessment<\/a> for regulated environments.<!-- [et_pb_line_break_holder] --><\/pee><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><\/p>\n<h3>\ud83d\ude80 CloudOps Designed for Scientists<\/h3>\n<p><!-- [et_pb_line_break_holder] --><pee><!-- [et_pb_line_break_holder] -->Whether supporting genomics pipelines or simulation workloads, PTP focuses on aligning infrastructure with research goals. They offer integration with lab tools like ELNs and LIMS, and provide <a href=\"https:\/\/ptp.cloud\/services\/cloudops\/cloud-migration\/\" title=\"cloud migration\">cloud migration<\/a> support that reduces friction and accelerates time to science.<!-- [et_pb_line_break_holder] --><\/pee><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><\/p>\n<h3>\ud83c\udfaf Enabling Autonomy Through Training<\/h3>\n<p><!-- [et_pb_line_break_holder] --><pee><!-- [et_pb_line_break_holder] -->Unlike many providers, PTP empowers customers through training and direct access\u2014not vendor lock-in. Their cloud engineering team supports organizations with hands-on education and <a href=\"https:\/\/ptp.cloud\/resources\/learning-videos\/\" title=\"cloud training\">training videos<\/a> that build internal expertise.<!-- [et_pb_line_break_holder] --><\/pee><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><\/p>\n<h3>\ud83c\udf99\ufe0f Join the Conversation<\/h3>\n<p><!-- [et_pb_line_break_holder] --><pee><!-- [et_pb_line_break_holder] -->PTP regularly shares insights at events like <a href=\"https:\/\/ptp.cloud\/events\/ptp-at-aws-reinvent-2024-join-us-in-las-vegas-for-cutting-edge-cloud-innovation\/\" title=\"AWS re:Invent\">AWS re:Invent<\/a> and <a href=\"https:\/\/ptp.cloud\/ptp-at-bioit-world-2025\/\" title=\"Bio-IT World\">Bio-IT World<\/a>. This conversation offers a valuable glimpse into how top AWS partners solve critical challenges for life sciences.<!-- [et_pb_line_break_holder] --><\/pee><!-- [et_pb_line_break_holder] --><\/article>\n<p><!-- [et_pb_line_break_holder] --><!-- [et_pb_line_break_holder] --><script type=\"application\/ld+json\"><!-- [et_pb_line_break_holder] -->{<!-- [et_pb_line_break_holder] -->\"@context\": \"https:\/\/schema.org\",<!-- [et_pb_line_break_holder] -->\"@type\": \"VideoObject\",<!-- [et_pb_line_break_holder] -->\"name\": \"HPC in Life Sciences with AWS and PTP\",<!-- [et_pb_line_break_holder] -->\"description\": \"PTP Cloud Architect Aaron Jeskey joins Jon Myer to discuss how life sciences organizations can optimize HPC environments in AWS. 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He explains how PTP performs AWS Well-Architected Reviews to identify cost and security issues in biotech environments, and how they guide clients through cloud-native HPC implementations. Topics include Transit Gateway, serverless compute triggers, and secure data migrations from lab instruments into AWS S3. Aaron also emphasizes PTP\u2019s approach to empowering customers with training and architecture reviews rather than vendor lock-in. Whether supporting genomics pipelines, bioreactors, or clinical data lakes, PTP delivers a full-stack solution for research teams that demand high performance, low latency, and regulatory compliance.\"<!-- [et_pb_line_break_holder] -->}<!-- [et_pb_line_break_holder] --><\/script><!-- [et_pb_line_break_holder] --><\/p>\n<section style=\"background-color: #f4f4f4; padding: 2em; border-radius: 8px; margin-top: 2em;\"><!-- [et_pb_line_break_holder] --><\/p>\n<h3>\ud83d\udd0e Transcript Highlights: HPC in Life Sciences with AWS and PTP<\/h3>\n<p><!-- [et_pb_line_break_holder] --><pee><strong>00:10<\/strong> \u2013 PTP\u2019s straightforward and planning-driven approach to HPC cloud architecture<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>00:50<\/strong> \u2013 Right-sizing AWS clusters to improve life sciences IT performance<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>01:12<\/strong> \u2013 Leveraging AWS-native HPC tools for life sciences research pipelines<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>02:05<\/strong> \u2013 Introducing Aaron Jeskey and his HPC and life sciences expertise<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>04:36<\/strong> \u2013 Clarifying high-performance computing (HPC) vs traditional clustering for bioinformatics workflows<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>06:01<\/strong> \u2013 Challenges in HPC infrastructure for early-stage biotech companies<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>07:00<\/strong> \u2013 Conducting AWS Well-Architected Reviews for research IT optimization<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>09:02<\/strong> \u2013 Cost control by identifying waste in long-running AWS compute clusters<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>11:03<\/strong> \u2013 Empowering biotech teams through training instead of vendor lock-in<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>13:30<\/strong> \u2013 Real-world client story: migrating scientific software from laptop to AWS WorkSpaces<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>15:27<\/strong> \u2013 Optimizing AWS GPU usage for HPC in life sciences via spot instances and AZ scaling<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>17:00<\/strong> \u2013 Security improvements: VPN, Transit Gateway, IAM policy enforcement in regulated environments<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>20:00<\/strong> \u2013 Building long-term research partnerships through cloud enablement and strategy<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>24:00<\/strong> \u2013 Why hands-on cloud architecture expertise matters for biotech HPC success<\/pee><!-- [et_pb_line_break_holder] --><pee><strong>33:00<\/strong> \u2013 Trends in instrument data migration, IoT pipelines, and AWS-native scientific analysis<\/pee><!-- [et_pb_line_break_holder] --><\/section>\n[\/et_pb_code][\/et_pb_column][\/et_pb_row][et_pb_row _builder_version=&#8221;4.27.4&#8243; _module_preset=&#8221;default&#8221; background_color=&#8221;#f2f2f2&#8243; custom_margin=&#8221;27px|auto||auto||&#8221; custom_padding=&#8221;18px|18px|18px|18px|true|true&#8221; border_radii=&#8221;on|5px|5px|5px|5px&#8221; locked=&#8221;off&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_column type=&#8221;4_4&#8243; _builder_version=&#8221;4.27.4&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;][et_pb_text _builder_version=&#8221;4.27.4&#8243; _module_preset=&#8221;default&#8221; global_colors_info=&#8221;{}&#8221;]\n<p data-start=\"359\" data-end=\"580\"><strong data-start=\"4735\" data-end=\"4789\">Ready to optimize your life sciences HPC pipeline?<\/strong><br data-start=\"4789\" data-end=\"4792\" \/>Get a free cloud assessment to uncover inefficiencies, reduce spend, and align your cloud architecture with research goals.<\/p>\n[\/et_pb_text][dsm_button button_one_text=&#8221;\ud83d\udc49 Request your Free Cloud Assessment&#8221; button_one_url=&#8221;https:\/\/ptp.cloud\/services\/cloudops\/cloud-assessment\/&#8221; button_two_text=&#8221;\ud83d\udc49 PTP&#8217;s HCP Case Studies&#8221; button_two_url=&#8221;https:\/\/ptp.cloud\/resources\/case-studies\/&#8221; button_alignment=&#8221;left&#8221; separator_text=&#8221;or explore&#8221; _builder_version=&#8221;4.27.4&#8243; _module_preset=&#8221;default&#8221; custom_button_one=&#8221;on&#8221; button_one_text_size=&#8221;14px&#8221; button_one_text_color=&#8221;#ffffff&#8221; button_one_bg_color=&#8221;#0eabf4&#8243; button_one_border_width=&#8221;0px&#8221; button_one_border_radius=&#8221;3px&#8221; button_one_font=&#8221;|600|||||||&#8221; button_one_use_icon=&#8221;off&#8221; button_one_custom_margin=&#8221;|11px|||false|false&#8221; custom_button_two=&#8221;on&#8221; button_two_text_size=&#8221;14px&#8221; button_two_text_color=&#8221;#ffffff&#8221; button_two_bg_color=&#8221;#0eabf4&#8243; button_two_border_width=&#8221;0px&#8221; button_two_border_radius=&#8221;3px&#8221; button_two_font=&#8221;|600|||||||&#8221; button_two_use_icon=&#8221;off&#8221; custom_margin=&#8221;|||0px|false|false&#8221; box_shadow_style_button_one=&#8221;preset2&#8243; box_shadow_style_button_two=&#8221;preset2&#8243; box_shadow_blur_button_two=&#8221;19px&#8221; global_colors_info=&#8221;{}&#8221;][\/dsm_button][\/et_pb_column][\/et_pb_row][\/et_pb_section]\n<span class=\"et_bloom_bottom_trigger\"><\/span>","protected":false},"excerpt":{"rendered":"<p>PTP Cloud Architect Aaron Jeskey shares how life sciences teams can optimize high-performance computing (HPC) environments on AWS for security, speed, and compliance.<\/p>\n","protected":false},"author":2,"featured_media":11602,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_et_pb_use_builder":"on","_et_pb_old_content":"<a href=\"https:\/\/www.linkedin.com\/in\/ajeskey\/\">Aaron Jeskey<\/a>, Sr. Cloud Architect of PTP sits with Jon Myer of Myer Media to deconstruct High Performance Computing, HPC, and how it can accelerate pipeline workflows in AWS. \u00a0Great conversation between Jon and Aaron getting under the hood of HPC what PTP is doing for our <a href=\"https:\/\/ptp.cloud\/aws-for-life-sciences-practice\/\">life sciences customers<\/a>. \u00a0[Details on timeline below]\r\n\r\n[embed]https:\/\/youtu.be\/ud57yCG7BSQ[\/embed]\r\n\r\n\u00a0\r\n\r\n\u231a\ufe0f Timeline\r\n0:00 Introduction\r\n2:57 Mad Scientist\r\n3:32 How is PTP helping customers\r\n3:38 Define HPC\r\n5:22 PTP engagement\r\n5:32 14th member of Lifesciences in Americas\r\n6:18 PTP\r\n10:53 Engagement with Customers\r\n11:37 Customer Case Study\r\n14:11 Walk me through the environment and process\r\n15:48 Security controls\r\n17:39 Straightforward approach\r\n18:03 PTP Trusted Advisor of Lifescience\r\n19:32 Really understanding the business needs\r\n19:59 Long-term relationship building\r\n20:39 Skills\r\n22:48 Specific Certifications to an area and helping customers\r\n27:48 Helping customers in capacity planning?\r\n28:36 Who's managing the overall environment?\r\n32:22 Growing in data migration\r\n\r\n_________________________________________________\r\n<h3><a href=\"https:\/\/ptp.cloud\/life-sciences-case-study-adaptive-phage-therapeutics\/\">HPC Case Study with Adaptive Phage<\/a><\/h3>\r\n_________________________________________________","_et_gb_content_width":"","content-type":"","_monsterinsights_skip_tracking":false,"_monsterinsights_sitenote_active":false,"_monsterinsights_sitenote_note":"","_monsterinsights_sitenote_category":0,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[23,12,9,180,83],"tags":[145],"table_tags":[],"class_list":["post-6474","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-aws-archive","category-aws-for-life-sciences-archive","category-cloudops-archive","category-devops-archive","category-learning-videos-archive","tag-hpc"],"yoast_head":"<!-- This site is optimized with the Yoast SEO plugin v26.1.1 - https:\/\/yoast.com\/wordpress\/plugins\/seo\/ -->\n<title>Optimizing HPC in Life Sciences with AWS and PTP<\/title>\n<meta name=\"description\" content=\"Learn how PTP helps biotech and clinical research teams optimize HPC on AWS\u2014improving 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content=\"2022-11-09T20:47:24+00:00\" \/>\n<meta property=\"article:modified_time\" content=\"2025-07-22T06:06:33+00:00\" \/>\n<meta property=\"og:image\" content=\"https:\/\/ptp.cloud\/wp-content\/uploads\/2022\/11\/Jon_Myer_Podcast_Ep102_Aaron_Jeskey_HPC_Life_Sciences.jpg\" \/>\n\t<meta property=\"og:image:width\" content=\"862\" \/>\n\t<meta property=\"og:image:height\" content=\"482\" \/>\n\t<meta property=\"og:image:type\" content=\"image\/jpeg\" \/>\n<meta name=\"author\" content=\"Gary Derheim\" \/>\n<meta name=\"twitter:card\" content=\"summary_large_image\" \/>\n<meta name=\"twitter:creator\" content=\"@PTPCloud\" \/>\n<meta name=\"twitter:site\" content=\"@PTPCloud\" \/>\n<meta name=\"twitter:label1\" content=\"Written by\" \/>\n\t<meta name=\"twitter:data1\" content=\"Gary Derheim\" \/>\n\t<meta name=\"twitter:label2\" content=\"Est. reading time\" \/>\n\t<meta name=\"twitter:data2\" content=\"3 minutes\" \/>\n<script type=\"application\/ld+json\" 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